public class Tan07MixedNaMgCorrection extends EntropyCorrection implements NamedMethod
| Modifier and Type | Field and Description |
|---|---|
protected static java.lang.String |
entropyCorrection
String entropyCorrection : formula for the entropy correction
|
protected static java.lang.String |
gFormula
String gFormula : function associated with the electrostatic folding free energy per base stack.
|
protected static java.lang.String |
x1Formula
String x1Formula : formula representing the fractional contribution of Na+ ions
|
protected static java.lang.String |
x2Formula
String x2Formula : formula representing the fractional contribution of Mg2+ ions
|
| Constructor and Description |
|---|
Tan07MixedNaMgCorrection() |
| Modifier and Type | Method and Description |
|---|---|
protected double |
correctEntropy(Environment environment)
corrects the computed entropy (delta S (Na = 1M)).
|
java.lang.String |
getName()
Gets the full name of the method.
|
boolean |
isApplicable(Environment environment)
Check if the environment chosen by the user is a applicable with the correction model.
|
correctMeltingResultsprotected static java.lang.String entropyCorrection
protected static java.lang.String x1Formula
protected static java.lang.String x2Formula
protected static java.lang.String gFormula
public boolean isApplicable(Environment environment)
CorrectionMethodisApplicable in interface CorrectionMethodisApplicable in class EntropyCorrectionprotected double correctEntropy(Environment environment)
EntropyCorrectioncorrectEntropy in class EntropyCorrectionpublic java.lang.String getName()
getName in interface NamedMethod